Co-expression analysis

Gene ID	Ta.19849.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g80950: phospholipid/glycerol acyltransferase family protein (HF=2e-10)
Module size	20 genes
NF	0.22
%ile	37.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.96	Ta.19849.1.S1_at	CD373669	-	-	2e-10	At1g80950	phospholipid/glycerol acyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.9112.1.S1_at	BJ237987	-	-	5e-2	At1g08370	DCP1 (decapping 1)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.9232.1.S1_at	BJ263254	coated vesicle membrane protein-like	-	2e-1	At3g07680	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	Ta.6870.1.S1_at	BQ801361	-	-	1e-18	At5g56580	MKK6 (MAP KINASE KINASE 6)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.97	Ta.6618.2.S1_a_at	CA642797	-	-	5e-4	At3g17880	ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.97	Ta.26421.1.S1_at	CD879054	-	-	2e+0	At5g52750	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.97	Ta.6039.3.S1_at	CA697744	-	-	3e-1	At1g77180	chromatin protein family	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.97	Ta.30747.1.S1_a_at	CK209124	-	-	5e+0	At5g01712	CPuORF48 (Conserved peptide upstream open reading frame 48)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.97	Ta.7599.1.S1_at	BJ219890	-	-	4e-15	At1g60170	emb1220 (embryo defective 1220)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.97	TaAffx.128748.1.S1_at	CK153512	-	-	9e+0	Atmg01280	-	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.97	Ta.20656.1.S1_at	CA686685	-	-	5e-1	At5g53470	ACBP1 (ACYL-COA BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.97	Ta.1602.1.S1_at	CA721317	-	-	2e+0	At5g55200	co-chaperone grpE protein, putative	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.98	Ta.21149.1.S1_at	CD872798	-	-	8e-6	At1g02680	TAF13 (TBP-ASSOCIATED FACTOR 13)	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.97	Ta.22913.1.S1_at	CA715053	-	-	1e+1	At5g61200	-	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.96	Ta.13175.2.A1_a_at	BJ250100	-	-	4e-3	At3g62770	AtATG18a	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.97	TaAffx.113600.1.S1_s_at	CA608828	-	-	6e+0	At3g27160	GHS1 (GLUCOSE HYPERSENSITIVE 1)	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.98	Ta.1602.1.S1_x_at	CA721317	-	-	2e+0	At5g55200	co-chaperone grpE protein, putative	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.96	Ta.9826.1.S1_at	BE213383	-	-	9e+0	At5g48543	LCR1 (Low-molecular-weight cysteine-rich 1)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.96	Ta.5411.3.A1_at	BJ297324	-	-	1e+0	At1g19990	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.97	Ta.2668.1.S1_at	BJ280117	-	-	1e-22	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	96.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.5	92.5	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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