Co-expression analysis

Gene ID Ta.1964.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g13500: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.68
%ile 91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.97Ta.1964.1.S1_x_atCD890475--2e+0At3g13500unknown proteinO.I.H.G.S.X.
0.7389.10.97Ta.7261.2.A1_atBJ309551--3e-1At1g28960ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)O.I.H.G.S.X.
0.7188.00.96Ta.1964.3.S1_x_atCK213330--2e+0At3g13500unknown proteinO.I.H.G.S.X.
0.6081.00.97Ta.7261.2.A1_a_atBJ309551--3e-1At1g28960ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)O.I.H.G.S.X.
0.5072.40.97Ta.1964.1.S1_a_atCD890475--2e+0At3g13500unknown proteinO.I.H.G.S.X.
0.3549.80.97Ta.13250.2.S1_x_atCK158867--7e-4At5g20720CPN20 (CHAPERONIN 20)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.399.3GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
7.098.5GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.998.4GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.798.4GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.498.2GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.298.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.397.6GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.495.2GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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