Co-expression analysis

Gene ID	Ta.1964.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g13500: unknown protein (HF=2e+0)
Module size	11 genes
NF	0.53
%ile	79.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.72	88.3	0.96	Ta.1964.1.S1_a_at	CD890475	-	-	2e+0	At3g13500	unknown protein	O.I.	H.G.	S.X.	Please select
0.70	87.2	0.96	Ta.1964.1.S1_x_at	CD890475	-	-	2e+0	At3g13500	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.28895.1.S1_s_at	AY217751.1	-	-	2e-19	At5g13120	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.13731.1.S1_at	AY217753.1	-	-	6e-29	At5g13120	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.2429.2.S1_a_at	CK215557	-	-	5e+0	At1g27530	-	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.96	Ta.1964.3.S1_x_at	CK213330	-	-	2e+0	At3g13500	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.98	Ta.13250.2.S1_x_at	CK158867	-	-	7e-4	At5g20720	CPN20 (CHAPERONIN 20)	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.96	Ta.2429.2.S1_x_at	CK215557	-	-	5e+0	At1g27530	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.28883.1.A1_at	AJ612385	-	-	5e+0	At5g20720	CPN20 (CHAPERONIN 20)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.1381.2.S1_at	BQ172233	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.1381.2.S1_x_at	BQ172233	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.0	99.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.9	99.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.8	98.9	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.8	98.9	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.8	98.9	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.4	98.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.2	98.1	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.0	97.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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