Co-expression analysis

Gene ID	Ta.19319.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g12070: Rho GDP-dissociation inhibitor family protein (HF=1e-4)
Module size	11 genes
NF	0.15
%ile	28.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.2	0.88	Ta.19319.1.S1_x_at	CA649723	-	-	1e-4	At1g12070	Rho GDP-dissociation inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	Ta.14163.1.S1_at	BJ214044	-	-	3e+0	At5g18380	40S ribosomal protein S16 (RPS16C)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.94	Ta.3645.1.S1_at	BJ213973	-	-	4e+0	At3g60520	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.95	Ta.22187.1.S1_x_at	CB307707	-	-	2e-1	At1g47500	ATRBP47C' (RNA-binding protein 47C')	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.95	Ta.22187.1.S1_at	CB307707	-	-	2e-1	At1g47500	ATRBP47C' (RNA-binding protein 47C')	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.90	Ta.9578.2.S1_a_at	BJ304324	-	-	2e-2	At1g30800	-	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.94	Ta.4966.1.A1_at	BJ306736	-	-	2e+1	Atcg00530	-	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.95	TaAffx.118567.1.A1_at	BJ318706	-	-	4e+0	At5g50250	31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.91	Ta.19319.2.S1_at	CA650134	-	-	9e-1	At3g07880	Rho GDP-dissociation inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.91	Ta.6700.1.S1_at	BJ304228	-	-	1e+0	At1g21065	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.91	Ta.11817.1.A1_at	BQ170855	-	-	3e+0	At4g15150	glycine-rich protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.3	99.4	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
11.5	99.3	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
10.4	99.2	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.1	99.2	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
9.9	99.1	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.4	99.1	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1	98.1	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1	98.1	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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