Co-expression analysis

Gene ID	Ta.19265.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g16070: PDV2 (PLASTID DIVISION2) (HF=1e+0)
Module size	20 genes
NF	0.24
%ile	40.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.66	84.1	0.93	Ta.19265.1.S1_at	CA649365	-	-	1e+0	At2g16070	PDV2 (PLASTID DIVISION2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.8916.1.A1_at	BQ162631	-	-	5e+0	At5g15840	CO (CONSTANS)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.22398.1.S1_at	CA597140	-	-	8e+0	At5g20100	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.95	Ta.9418.1.S1_at	BQ162215	-	-	1e+0	At5g23540	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.95	Ta.25949.1.S1_a_at	CD454725	-	-	6e+0	At5g52830	WRKY27	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.95	TaAffx.19604.1.A1_at	BJ309279	-	-	3e-1	At5g47090	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.94	Ta.8787.1.S1_at	BQ162402	-	-	7e+0	At5g38380	-	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.95	Ta.9126.1.A1_at	BJ323019	-	-	3e-1	At4g18501	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.95	TaAffx.39988.1.A1_at	BJ275531	-	-	4e+0	At5g52740	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.94	Ta.11156.1.S1_at	BQ169519	-	-	7e+0	At4g39200	40S ribosomal protein S25 (RPS25E)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.95	Ta.2818.1.S1_x_at	BJ319737	-	-	6e-1	At1g53260	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.95	Ta.25809.1.S1_at	CD374030	-	-	6e-1	At1g20540	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.95	Ta.28754.1.S1_at	AJ604404	-	-	5e-1	At4g24805	methyltransferase	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.95	TaAffx.38270.1.A1_at	BJ242226	-	-	1e+0	At2g13980	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.96	Ta.10241.1.S1_at	CK212105	-	-	3e+0	At2g07180	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.95	TaAffx.11289.1.S1_at	CA631316	-	-	3e+0	At5g38310	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.95	TaAffx.72097.1.S1_at	BJ260927	-	-	8e+0	At5g41450	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.95	Ta.1627.1.A1_at	BE443228	-	-	4e-1	At3g18410	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.95	Ta.25916.1.S1_at	BQ237506	-	-	4e-24	At1g01040	DCL1 (DICER-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.94	Ta.9006.1.S1_at	BQ162762	-	-	7e+0	At5g15840	CO (CONSTANS)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.4	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.0	94.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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