Co-expression analysis

Gene ID Ta.19238.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g44950: glycine-rich protein (HF=4e+0)
Module size 6 genes
NF 0.03
%ile 9.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.89Ta.19238.1.S1_atCA649145--4e+0At3g44950glycine-rich proteinO.I.H.G.S.X.
0.1922.40.93TaAffx.57873.1.S1_x_atCA624322--1e+1At4g01935unknown proteinO.I.H.G.S.X.
0.056.70.94TaAffx.114277.1.S1_atCA595853--4e+0At5g44060unknown proteinO.I.H.G.S.X.
0.012.40.95Ta.29495.1.S1_atCA649184--2e-1At3g06780glycine-rich proteinO.I.H.G.S.X.
0.012.40.95Ta.7378.19.S1_x_atCN010931--4e-11At1g07790HTB1O.I.H.G.S.X.
0.012.40.95Ta.7378.19.S1_atCN010931--4e-11At1g07790HTB1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.3GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.797.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM298059Crown tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.896.0GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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