Co-expression analysis

Gene ID Ta.19128.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g46600: scarecrow transcription factor family protein (HF=2e-1)
Module size 6 genes
NF 0.18
%ile 32.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.96Ta.19128.1.S1_a_atBJ263477--2e-1At3g46600scarecrow transcription factor family proteinO.I.H.G.S.X.
0.4464.50.96Ta.23203.1.S1_a_atCD905906--5e-5At4g08500MEKK1 (MAP KINASE KINASE KINASE 1)O.I.H.G.S.X.
0.4058.40.96Ta.14320.1.A1_atBU100245WRKY16 transcription factor-4e-8At5g28650WRKY74O.I.H.G.S.X.
0.2125.50.96TaAffx.4553.1.S1_s_atCA616367--6e-2At4g36780transcription regulatorO.I.H.G.S.X.
0.1112.40.96Ta.414.1.S1_s_atBF474970--1e+0At4g31120SKB1 (SHK1 BINDING PROTEIN 1)O.I.H.G.S.X.
0.0910.40.96Ta.5756.1.S1_atCA650595--7e-1At1g80590WRKY66O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.299.8GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
20.599.7GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
16.899.6GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
14.999.5GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
13.999.5GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
12.899.4GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.498.9GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.698.3GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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