Co-expression analysis

Gene ID	Ta.19128.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g46600: scarecrow transcription factor family protein (HF=2e-1)
Module size	6 genes
NF	0.18
%ile	32.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.96	Ta.19128.1.S1_a_at	BJ263477	-	-	2e-1	At3g46600	scarecrow transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.23203.1.S1_a_at	CD905906	-	-	5e-5	At4g08500	MEKK1 (MAP KINASE KINASE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	Ta.14320.1.A1_at	BU100245	WRKY16 transcription factor	-	4e-8	At5g28650	WRKY74	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.96	TaAffx.4553.1.S1_s_at	CA616367	-	-	6e-2	At4g36780	transcription regulator	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.96	Ta.414.1.S1_s_at	BF474970	-	-	1e+0	At4g31120	SKB1 (SHK1 BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.96	Ta.5756.1.S1_at	CA650595	-	-	7e-1	At1g80590	WRKY66	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.2	99.8	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
20.5	99.7	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
16.8	99.6	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
14.9	99.5	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.9	99.5	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.8	99.4	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.4	98.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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