Co-expression analysis

Gene ID Ta.19063.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g23290: PDF5 (PREFOLDIN 5) (HF=4e+0)
Module size 6 genes
NF 0.10
%ile 22.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.93Ta.19063.1.S1_atCA646746--4e+0At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.4058.40.94TaAffx.59306.1.S1_atCA603735--1e+0At4g22570APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)O.I.H.G.S.X.
0.1922.40.94TaAffx.112465.1.S1_s_atCA623726--3e-13At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.H.G.S.X.
0.1415.80.94TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinO.I.H.G.S.X.
0.056.70.93TaAffx.50210.1.S1_atCA744417--7e-2At1g60880AGL56O.I.H.G.S.X.
0.045.80.93TaAffx.31313.1.S1_atCA617546--1e+1At3g52561unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.199.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.799.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.798.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.897.9GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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