Co-expression analysis

Gene ID Ta.1905.3.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g06460: ATUBA2 (HF=2e-2)
Module size 47 genes
NF 0.42
%ile 66.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.60.95Ta.1905.3.S1_x_atBJ282136--2e-2At5g06460ATUBA2O.I.H.G.S.X.
0.5779.20.97Ta.13236.1.S1_atBM136267SUSIBA2-like protein-2e-18At4g26640WRKY20O.I.H.G.S.X.
0.5576.80.97Ta.28553.1.S1_s_atX56601.1ubiquitin /// ubiquitin-7e-57At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.5475.50.97AFFX-Tae-r2-Bs-thr-5_s_atAFFX-Tae-r2-Bs-thr-5---O.I.H.G.S.X.
0.5374.90.97Ta.16668.1.S1_x_atCK212492--2e+0At3g54826-O.I.H.G.S.X.
0.5374.90.98Ta.28553.6.S1_x_atBJ221503--7e-47At4g02890UBQ14O.I.H.G.S.X.
0.5273.70.97Ta.1058.1.S1_x_atCK168726S-adenosylmethionine decarboxylase precursor-5e-12At3g02468CPuORF9 (Conserved peptide upstream open reading frame 9)O.I.H.G.S.X.
0.5273.70.97Ta.12565.1.S1_atCK205701--2e-3At4g24690ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.4869.00.98Ta.11141.2.S1_s_atCD879301--2e-99At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.4869.00.97AFFX-Tae-r2-Ec-bioB-3_atAFFX-Tae-r2-Ec-bioB-3---O.I.H.G.S.X.
0.4869.00.98Ta.27101.10.S1_x_atAJ613323--1e-26At5g10980histone H3O.I.H.G.S.X.
0.4869.00.97Ta.1058.2.S1_x_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
0.4869.00.99Ta.5057.3.A1_atCK194001Profilin /// Profilin-2e-12At4g29350PFN2 (PROFILIN 2)O.I.H.G.S.X.
0.4767.90.97Ta.7296.1.S1_atBJ252648--4e-5At3g45000VPS24.2O.I.H.G.S.X.
0.4767.90.98Ta.28553.3.S1_x_atBJ274700Polyubiquitin-0At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.4666.80.98Ta.1078.2.S1_a_atBJ252383Cyclophilin-8e-6At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.4666.80.97Ta.8474.1.A1_atBQ161952--6e-15At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.
0.4666.80.98Ta.2502.1.S1_a_atBJ241868HSP80-2-0At5g56000heat shock protein 81-4 (HSP81-4)O.I.H.G.S.X.
0.4666.80.98Ta.1058.2.S1_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
0.4666.80.97Ta.1058.3.S1_x_atCN013117S-adenosylmethionine decarboxylase precursor-8e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
0.4464.50.98Ta.1310.1.S1_x_atBJ282404translationally controlled tumor protein-1e-10At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.
0.4464.50.98Ta.24977.1.S1_x_atCK205284--5e-67At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.4464.50.98Ta.28783.1.S1_x_atU32310.1single-stranded nucleic acid binding protein-5e-4At4g39260GR-RBP8O.I.H.G.S.X.
0.4260.90.97Ta.14353.1.S1_atBU100478--5e-4At5g52200unknown proteinO.I.H.G.S.X.
0.4260.90.98Ta.1198.1.S1_atBJ272933--1e-8At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.4159.60.98Ta.14126.1.S1_atBE429982--5e-4At1g15270-O.I.H.G.S.X.
0.4058.40.97Ta.5857.1.S1_atBJ297508--8e-1At2g17730zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4058.40.97Ta.2839.1.S1_atCD876245--8e-4At4g00026-O.I.H.G.S.X.
0.4058.40.97Ta.12532.1.S1_atBQ166155--2e-8At5g52580RAB GTPase activatorO.I.H.G.S.X.
0.3956.10.96Ta.9729.2.A1_a_atCA672059--4e-6At5g63970copine-relatedO.I.H.G.S.X.
0.3854.70.98Ta.7299.1.S1_atCK162098--6e-36At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)O.I.H.G.S.X.
0.3651.90.97Ta.11874.1.S1_atBQ170969--2e+0At5g39530unknown proteinO.I.H.G.S.X.
0.3651.90.96Ta.30056.1.S1_atCD903551--4e-18At3g55320PGP20 (P-GLYCOPROTEIN 20)O.I.H.G.S.X.
0.3651.90.97Ta.1709.1.S1_x_atCK208738--2e-53At2g27600SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)O.I.H.G.S.X.
0.3549.80.97Ta.8384.1.S1_atBQ161820--2e+0At1g16530ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)O.I.H.G.S.X.
0.3549.80.97Ta.7540.2.S1_atBJ320845--4e-6At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.3549.80.97Ta.5312.3.S1_x_atCA638807--4e+0At2g17190ubiquitin family proteinO.I.H.G.S.X.
0.3448.10.97Ta.11481.1.A1_atBQ170184--4e-1At3g59800unknown proteinO.I.H.G.S.X.
0.3448.10.97Ta.28321.1.S1_a_atCK211481Ubiquitin-conjugating enzyme-2e-25At3g08690UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)O.I.H.G.S.X.
0.3346.90.97Ta.9300.1.S1_atBJ238999--5e-1At3g08770LTP6O.I.H.G.S.X.
0.3346.90.97Ta.25681.1.S1_atAJ614892--3e-2At2g22145-O.I.H.G.S.X.
0.3244.40.97Ta.20656.1.S1_atCA686685--5e-1At5g53470ACBP1 (ACYL-COA BINDING PROTEIN 1)O.I.H.G.S.X.
0.3244.40.96Ta.29595.1.A1_atCD373725--1e+0At5g41640unknown proteinO.I.H.G.S.X.
0.3040.90.96Ta.16834.1.S1_atBJ283123--7e-1At4g39390NST-K1 (NUCLEOTIDE SUGAR TRANSPORTER-KT 1)O.I.H.G.S.X.
0.2939.20.96Ta.5614.1.A1_atCK163874--2e+0At5g28470transporterO.I.H.G.S.X.
0.2839.20.97Ta.1602.1.S1_x_atCA721317--2e+0At5g55200co-chaperone grpE protein, putativeO.I.H.G.S.X.
0.2633.60.97Ta.2679.1.S1_atBG607727--7e-1At4g23630BTI1 (VIRB2-INTERACTING PROTEIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.598.3GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
3.896.0GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.495.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.994.0GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage