Co-expression analysis

Gene ID Ta.18931.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g47870: unknown protein (HF=2e-11)
Module size 11 genes
NF 0.51
%ile 77.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.40.94Ta.18931.2.S1_x_atCA656734--2e-11At5g47870unknown proteinO.I.H.G.S.X.
0.6786.30.95TaAffx.31791.1.S1_atCA607567--7e-1At5g26717-O.I.H.G.S.X.
0.6786.30.95Ta.1965.1.S1_atCA634037--6e-3At4g23330eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.6786.30.96TaAffx.8469.1.S1_atCA624919--1e+1At4g13140-O.I.H.G.S.X.
0.6483.60.95TaAffx.58533.1.S1_atCA618813--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.6182.00.96TaAffx.30673.1.S1_atCA623010--7e-11At4g25630FIB2 (FIBRILLARIN 2)O.I.H.G.S.X.
0.5072.40.95Ta.9891.2.S1_atCA605647--5e-2At4g01900GLB1 (GLNB1 HOMOLOG)O.I.H.G.S.X.
0.4666.80.95TaAffx.84292.1.S1_atCA640524--2e+0At4g05070unknown proteinO.I.H.G.S.X.
0.3651.90.95TaAffx.58638.1.S1_atCA617698--4e+0At1g12805nucleotide bindingO.I.H.G.S.X.
0.3244.40.95TaAffx.79549.1.S1_s_atCA713253Protein serine/threonine kinase-like-1e+1At4g39260GR-RBP8O.I.H.G.S.X.
0.2329.00.95Ta.3203.2.S1_x_atCA621738--5e-6At1g27530-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.697.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.296.6GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.096.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.395.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.294.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.893.6GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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