Co-expression analysis

Gene ID Ta.18931.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g47870: unknown protein (HF=2e-11)
Module size 6 genes
NF 0.06
%ile 15.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.96Ta.18931.1.S1_x_atCA644446--2e-11At5g47870unknown proteinO.I.H.G.S.X.
0.1821.00.95Ta.18931.2.S1_a_atCA656734--2e-11At5g47870unknown proteinO.I.H.G.S.X.
0.078.60.96Ta.5033.3.S1_x_atBQ168925--3e-1At1g21130O-methyltransferase, putativeO.I.H.G.S.X.
0.078.60.96Ta.5033.2.S1_x_atBJ235748--3e-1At1g21130O-methyltransferase, putativeO.I.H.G.S.X.
0.034.70.96Ta.2177.1.S1_atBJ283086--4e-5At3g01850ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putativeO.I.H.G.S.X.
0.034.70.96Ta.22495.2.S1_x_atCK197022--1e-1At5g66815unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.399.5GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
13.599.5GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.698.9GSM298080Leaf tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.198.8GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.198.5GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.098.5GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.498.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.897.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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