Co-expression analysis

Gene ID Ta.18914.3.A1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g59500: unknown protein (HF=4e+0)
Module size 21 genes
NF 0.48
%ile 74.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.90.93Ta.18914.3.A1_a_atCA666584--4e+0At5g59500unknown proteinO.I.H.G.S.X.
0.8092.20.95TaAffx.38217.1.S1_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.6786.30.94TaAffx.24685.1.S1_atCA714323--3e+0At2g36080DNA-binding protein, putativeO.I.H.G.S.X.
0.5979.80.94TaAffx.64156.1.S1_atBJ313261--4e+0At5g19830aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.5879.20.94TaAffx.8491.1.S1_x_atCA624450--2e+1At5g28463unknown proteinO.I.H.G.S.X.
0.5779.20.94TaAffx.38815.1.A1_atBJ216899--1e+0At5g24170-O.I.H.G.S.X.
0.5576.80.94TaAffx.59462.1.S1_atCA600120--7e-2At2g42040-O.I.H.G.S.X.
0.5374.90.94Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.5273.70.94TaAffx.107754.1.S1_atCD876350--1e+0At2g21780unknown proteinO.I.H.G.S.X.
0.5173.00.94Ta.2167.3.S1_a_atCA647226--3e-13At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.5072.40.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.4767.90.94TaAffx.7591.1.S1_atCA656091--2e+1Atmg01020-O.I.H.G.S.X.
0.4767.90.94TaAffx.110759.1.S1_atCA654729--1e+0At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4464.50.95TaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.4260.90.94TaAffx.105893.1.S1_x_atCA728292--3e-1At1g74890ARR15 (RESPONSE REGULATOR 15)O.I.H.G.S.X.
0.4260.90.95Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.3753.00.94TaAffx.105451.1.S1_atCA734135--1e+0At3g06730thioredoxin family proteinO.I.H.G.S.X.
0.3448.10.95TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.3448.10.95TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.2939.20.94TaAffx.113756.1.S1_atCA605644--1e-3At5g04250OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2633.60.95Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.496.8GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage