Co-expression analysis

Gene ID	Ta.18801.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g47540: pollen Ole e 1 allergen and extensin family protein (HF=1e-1)
Module size	7 genes
NF	0.39
%ile	62.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.82	Ta.18801.1.S1_at	CA642342	-	-	1e-1	At2g47540	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.89	Ta.7882.1.S1_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.89	Ta.18807.1.A1_at	CA642371	-	-	8e-2	At3g48460	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.88	Ta.7882.1.S1_x_at	BQ160849	-	-	2e+0	At4g16750	DRE-binding transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.85	Ta.7882.2.S1_a_at	CA645408	-	-	1e+0	At2g04790	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.90	Ta.1800.1.S1_at	BE445382	-	-	4e+0	At3g55646	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.84	Ta.21013.1.S1_at	CA641421	-	-	9e-2	At1g06475	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.7	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
17.1	99.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
13.8	99.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
9.3	99.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.5	98.3	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.5	98.3	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.1	98.1	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

A co-expression module including the maize gene, Zm.12077.1.A1_at, orthologous to the query gene, Ta.18801.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	Zm.12077.1.A1_at	At2g47540	hypothetical protein LOC100193845	-	2e+0	At2g16510	vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)	O.I.	H.G.	S.X.	Please select
0.67	85.8	Zm.6637.1.A1_at	At2g47540	hypothetical protein LOC100192588	-	2e-4	At3g20550	DDL (DAWDLE)	O.I.	H.G.	S.X.	Please select
0.67	85.8	Zm.13071.1.A1_at	At2g47540	transposon protein	-	6e-1	At3g17660	AGD15 (ARF-GAP domain 15)	O.I.	H.G.	S.X.	Please select
0.60	77.8	Zm.1151.1.A1_at	At2g47540	protein yippee-like	-	5e-4	At3g11230	yippee family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	Zm.7178.1.S1_at	At2g47540	-	-	4e+0	At2g29180	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	Zm.2059.1.S1_at	At2g47540	-	-	1e-86	At3g58610	ketol-acid reductoisomerase	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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