Co-expression analysis

Gene ID Ta.18801.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g47540: pollen Ole e 1 allergen and extensin family protein (HF=1e-1)
Module size 7 genes
NF 0.39
%ile 62.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.82Ta.18801.1.S1_atCA642342--1e-1At2g47540pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.6081.00.89Ta.7882.1.S1_atBQ160849--2e+0At4g16750DRE-binding transcription factor, putativeO.I.H.G.S.X.
0.4767.90.89Ta.18807.1.A1_atCA642371--8e-2At3g48460GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.3549.80.88Ta.7882.1.S1_x_atBQ160849--2e+0At4g16750DRE-binding transcription factor, putativeO.I.H.G.S.X.
0.3346.90.85Ta.7882.2.S1_a_atCA645408--1e+0At2g04790unknown proteinO.I.H.G.S.X.
0.3142.70.90Ta.1800.1.S1_atBE445382--4e+0At3g55646unknown proteinO.I.H.G.S.X.
0.2024.00.84Ta.21013.1.S1_atCA641421--9e-2At1g06475unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.799.7GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
17.199.6GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.899.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
9.399.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
8.298.8GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.598.3GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.598.3GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.198.1GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.219669.1.S1_at, orthologous to the query gene, Ta.18801.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7794.9PtpAffx.219669.1.S1_atAt2g47540--1e+1At5g11740AGP15 (ARABINOGALACTAN PROTEIN 15)O.I.H.G.S.X.
0.3052.0PtpAffx.205757.1.S1_atAt2g47540high affinity inorganic phosphate transporter-2e-10At2g38940ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)O.I.H.G.S.X.
0.2441.8PtpAffx.224382.1.S1_atAt2g47540hypothetical protein-1e-6At5g39390leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.2238.3PtpAffx.202991.1.S1_atAt2g47540hypothetical protein-6e-1At3g04510LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2)O.I.H.G.S.X.
0.2034.6PtpAffx.78996.1.A1_atAt2g47540--5e+0At3g45673unknown proteinO.I.H.G.S.X.
0.1423.5PtpAffx.213771.1.S1_atAt2g47540hypothetical protein-7e-2At4g04370pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.1321.6PtpAffx.206150.1.S1_atAt2g47540hypothetical protein-4e+0At5g09990PROPEP5 (Elicitor peptide 5 precursor)O.I.H.G.S.X.
0.1321.6PtpAffx.218029.1.S1_atAt2g47540--3e+0At4g18470SNI1O.I.H.G.S.X.
0.1321.6PtpAffx.202188.1.S1_atAt2g47540--4e-11At1g01880DNA repair protein, putativeO.I.H.G.S.X.
0.1118.1PtpAffx.46815.2.S1_a_atAt2g47540chorismate mutase-2e-5At3g29200CM1 (CHORISMATE MUTASE 1)O.I.H.G.S.X.
0.1118.1PtpAffx.221877.1.S1_atAt2g47540hypothetical protein-2e+0At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.H.G.S.X.
0.1118.1PtpAffx.27445.1.S1_atAt2g47540--8e-1At3g10300calcium-binding EF hand family proteinO.I.H.G.S.X.
0.1118.1Ptp.1590.1.S1_a_atAt2g47540--2e+1Atmg00320-O.I.H.G.S.X.
0.1118.1PtpAffx.75047.1.A1_atAt2g47540hypothetical protein-2e+0At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)O.I.H.G.S.X.
0.1016.3PtpAffx.26140.1.S1_atAt2g47540--3e+0At2g06983SCRL16 (SCR-Like 16)O.I.H.G.S.X.
0.0914.6Ptp.457.2.S1_atAt2g47540hypothetical protein-8e-1At3g59360UTR6 (UDP-GALACTOSE TRANSPORTER 6)O.I.H.G.S.X.
0.0914.6PtpAffx.450.2.S1_atAt2g47540--2e-8At4g27280calcium-binding EF hand family proteinO.I.H.G.S.X.
0.0914.6PtpAffx.73033.1.S1_atAt2g47540hypothetical protein-3e-5At3g17950unknown proteinO.I.H.G.S.X.
0.0914.6PtpAffx.209579.1.S1_atAt2g47540hypothetical protein-2e-1At3g52150RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.0812.9PtpAffx.14238.5.A1_a_atAt2g47540--1e-3At4g00860ATOZI1O.I.H.G.S.X.
0.0711.6PtpAffx.131727.1.S1_atAt2g47540hypothetical protein-1e+0At4g00232unknown proteinO.I.H.G.S.X.
0.069.8PtpAffx.70116.1.A1_atAt2g47540--6e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinO.I.H.G.S.X.
0.069.8PtpAffx.223552.1.S1_atAt2g47540hypothetical protein-1e+0At3g54120reticulon family protein (RTNLB12)O.I.H.G.S.X.
0.069.8PtpAffx.212325.1.S1_s_atAt2g47540--4e-1At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)O.I.H.G.S.X.
0.069.8PtpAffx.206531.1.S1_atAt2g47540hypothetical protein-7e-33At4g30700pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.058.3Ptp.2456.2.S1_a_atAt2g47540hypothetical protein-2e-12At5g67590FRO1 (FROSTBITE1)O.I.H.G.S.X.
0.035.2Ptp.4346.1.S1_x_atAt2g47540hypothetical protein-1e-10At3g46430unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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