Co-expression analysis

Gene ID	Ta.18704.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g53300: UBC10 (ubiquitin-conjugating enzyme 10) (HF=3e-5)
Module size	6 genes
NF	0.47
%ile	73.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.90	Ta.18704.1.S1_x_at	BT009605.1	-	-	3e-5	At5g53300	UBC10 (ubiquitin-conjugating enzyme 10)	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.90	Ta.18704.1.S1_at	BT009605.1	-	-	3e-5	At5g53300	UBC10 (ubiquitin-conjugating enzyme 10)	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.89	Ta.21139.1.A1_at	CA722357	-	-	2e+1	At4g23895	pleckstrin homology (PH) domain-containing protein-related	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.89	Ta.16216.1.S1_s_at	CA602710	-	-	4e+0	At3g51260	PAD1 (20s proteasome alpha subunit pad1)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.90	Ta.30706.1.S1_at	AY543532.1	expansin EXPA6	-	8e+0	At2g03090	ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.93	Ta.1708.1.A1_at	BE445919	-	-	3e-1	At5g50430	UBC33 (ubiquitin-conjugating enzyme 33)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
34.3	99.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
29.7	99.8	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
12.6	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.7	98.9	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM138216	genotype H9 developing seed at 5 days after anthesis, biological rep2	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM111210	genotype B11 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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