Co-expression analysis

Gene ID Ta.18704.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g53300: UBC10 (ubiquitin-conjugating enzyme 10) (HF=3e-5)
Module size 6 genes
NF 0.47
%ile 72.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.90Ta.18704.1.S1_atBT009605.1--3e-5At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.8092.20.90Ta.18704.1.S1_x_atBT009605.1--3e-5At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.5576.80.91Ta.16216.1.S1_s_atCA602710--4e+0At3g51260PAD1 (20s proteasome alpha subunit pad1)O.I.H.G.S.X.
0.3346.90.93Ta.1708.1.A1_atBE445919--3e-1At5g50430UBC33 (ubiquitin-conjugating enzyme 33)O.I.H.G.S.X.
0.3142.70.90Ta.30706.1.S1_atAY543532.1expansin EXPA6-8e+0At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)O.I.H.G.S.X.
0.2329.00.92Ta.21109.1.A1_atCD879835--4e+0At3g51260PAD1 (20s proteasome alpha subunit pad1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.699.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
30.999.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
20.699.7GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
12.899.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
12.499.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.698.9GSM314263tissue type: seedling, crown - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.698.3GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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