Co-expression analysis

Gene ID	Ta.18244.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At2g26450: pectinesterase family protein (HF=3e-1)
Module size	6 genes
NF	0.65
%ile	89.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.94	Ta.18244.1.A1_at	CA632323	-	-	3e-1	At2g26450	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.95	TaAffx.111932.1.S1_at	CA630160	-	-	3e+0	At4g12990	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.20902.1.S1_x_at	BJ311735	-	-	4e-11	At5g10480	PAS2 (PASTICCINO 2)	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.95	Ta.401.1.S1_at	CK205688	-	-	3e-3	At1g63120	ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.93	Ta.26249.1.A1_at	CD491680	-	-	9e-2	At3g45150	TCP16 (TCP domain protein 16)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.95	Ta.29432.1.S1_at	BJ215997	-	-	1e-2	At1g05530	UGT75B2 (UDP-GLUCOSYL TRANSFERASE 75B2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.3	99.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.9	99.0	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.4	98.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.3	98.6	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.0	98.5	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.8	97.9	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.9	97.3	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.3	95.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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