Co-expression analysis

Gene ID Ta.1806.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g32760: protein transporter (HF=9e-11)
Module size 8 genes
NF 0.59
%ile 85.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.96Ta.1806.1.S1_atBE445559--9e-11At4g32760protein transporterO.I.H.G.S.X.
0.7891.10.96Ta.1806.1.S1_a_atBE445559--9e-11At4g32760protein transporterO.I.H.G.S.X.
0.6182.00.96Ta.1806.2.S1_atCA742803--4e+0At5g50870UBC27 (ubiquitin-conjugating enzyme 27)O.I.H.G.S.X.
0.6182.00.97Ta.10193.1.S1_atCK192997--1e-44At4g35830aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)O.I.H.G.S.X.
0.5374.90.96TaAffx.32988.1.S1_atCD876656--1e-2At4g08930ATAPRL6 (APR-like 6)O.I.H.G.S.X.
0.5072.40.97Ta.9238.1.S1_s_atCA644758--3e+0At3g51580unknown proteinO.I.H.G.S.X.
0.4666.80.97Ta.2592.1.S1_atCK200326--7e-5At3g16480MPPalpha (mitochondrial processing peptidase alpha subunit)O.I.H.G.S.X.
0.4565.20.96Ta.10193.2.S1_a_atCA640484--4e-22At4g35830aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.899.8GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
22.499.8GSM298077Leaf tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.298.8GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.098.8GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.498.2GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.597.8GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.197.5GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage