Co-expression analysis

Gene ID	Ta.1806.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At4g32760: protein transporter (HF=9e-11)
Module size	6 genes
NF	0.57
%ile	83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.97	Ta.1806.1.S1_a_at	BE445559	-	-	9e-11	At4g32760	protein transporter	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	TaAffx.32988.1.S1_at	CD876656	-	-	1e-2	At4g08930	ATAPRL6 (APR-like 6)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.97	Ta.9238.1.S1_s_at	CA644758	-	-	3e+0	At3g51580	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.10193.1.S1_at	CK192997	-	-	1e-44	At4g35830	aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	Ta.1806.1.S1_at	BE445559	-	-	9e-11	At4g32760	protein transporter	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.2592.1.S1_at	CK200326	-	-	7e-5	At3g16480	MPPalpha (mitochondrial processing peptidase alpha subunit)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.2	99.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
29.7	99.8	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.6	97.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.3	95.0	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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