Co-expression analysis

Gene ID Ta.18029.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g52500: unknown protein (HF=4e+0)
Module size 7 genes
NF 0.32
%ile 52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.20.87Ta.18029.1.S1_atCA627440--4e+0At5g52500unknown proteinO.I.H.G.S.X.
0.3142.70.92TaAffx.94124.1.A1_atBG904216--3e+0At3g46080zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3040.90.92TaAffx.143995.11.A1_s_atAY645945floral homeotic protein-9e-7At5g60120TOE2O.I.H.G.S.X.
0.2939.20.88Ta.20284.1.S1_atCA677396--3e-1At5g39950ATTRX2 (THIOREDOXIN 2)O.I.H.G.S.X.
0.2939.20.89TaAffx.113871.2.S1_atCA660307--9e-1At2g28760NAD-dependent epimerase/dehydratase family proteinO.I.H.G.S.X.
0.2532.10.92Ta.1160.2.S1_x_atCA635399--1e+0Atmg00490-O.I.H.G.S.X.
0.2024.00.89TaAffx.53534.1.S1_atCA691448--4e+0At4g24974-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.899.9GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
21.299.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
16.499.6GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.898.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.797.9GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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