Co-expression analysis

Gene ID	Ta.1800.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g55646: unknown protein (HF=4e+0)
Module size	13 genes
NF	0.60
%ile	86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.65	83.9	0.88	Ta.1800.1.S1_at	BE445382	-	-	4e+0	At3g55646	unknown protein	O.I.	H.G.	S.X.	Please select
0.72	88.3	0.91	Ta.7279.1.S1_at	CK152216	-	-	1e+1	At2g47400	CP12-1	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	Ta.6810.1.S1_a_at	CD492006	-	-	6e-1	At5g60360	AALP (Arabidopsis aleurain-like protease)	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.91	Ta.6810.1.S1_at	CD492006	-	-	6e-1	At5g60360	AALP (Arabidopsis aleurain-like protease)	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.92	Ta.19599.1.S1_at	CA653901	-	-	8e-1	At1g02130	ARA-5 (ARABIDOPSIS RAS 5)	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.89	TaAffx.128418.94.S1_at	CA631260	-	-	4e+0	At5g60460	sec61beta family protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.90	Ta.27000.1.A1_at	CD454142	-	-	8e+0	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.92	Ta.3628.1.S1_x_at	CF133144	-	-	2e+0	At1g73510	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.92	Ta.13535.1.S1_at	BE444975	-	-	1e+1	At5g19151	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.92	TaAffx.70418.1.S1_at	BQ802731	-	-	3e+1	At5g53040	RWP-RK domain-containing protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.89	Ta.6810.3.S1_x_at	CA653450	-	-	4e+0	At1g15010	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.94	Ta.21197.1.A1_at	CA603590	-	-	1e+1	At3g02910	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.91	Ta.14482.1.S1_at	BJ214882	-	-	2e-16	At1g10200	WLIM1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.8	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.7	98.7	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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