Co-expression analysis

Gene ID Ta.17976.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g02090: unknown protein (HF=5e-1)
Module size 10 genes
NF 0.27
%ile 44.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.89Ta.17976.1.S1_atCA626900--5e-1At5g02090unknown proteinO.I.H.G.S.X.
0.3549.80.94Ta.26301.1.A1_atCD490595--2e+0At1g75460ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.3142.70.93TaAffx.30271.1.S1_atCA626609--1e+0At5g46720-O.I.H.G.S.X.
0.2532.10.93TaAffx.30994.1.S1_atCA620446--4e+0At1g53625unknown proteinO.I.H.G.S.X.
0.2430.30.95TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.2329.00.94TaAffx.66028.1.S1_atBJ211464--8e+0At3g54826-O.I.H.G.S.X.
0.1415.80.95TaAffx.82721.1.S1_atCA668034--3e+1At4g20780calcium-binding protein, putativeO.I.H.G.S.X.
0.1415.80.96TaAffx.55653.1.S1_atCA663094--1e+1At4g20030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1415.80.94TaAffx.51397.1.S1_atCA725473--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.1314.60.93Ta.640.3.S1_atCA598400--1e+0At4g09270unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.399.7GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
16.499.6GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
9.899.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.298.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.298.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.097.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM111217genotype D15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.196.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.495.2GSM143505Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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