Co-expression analysis

Gene ID	Ta.17974.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g56045: ribosomal protein L41 family protein (HF=4e-11)
Module size	6 genes
NF	0.33
%ile	53.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.91	Ta.17974.1.A1_at	CA623388	-	-	4e-11	At1g56045	ribosomal protein L41 family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.91	Ta.17937.1.S1_at	CA626136	-	-	2e+0	At3g48450	nitrate-responsive NOI protein, putative	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.91	TaAffx.131855.1.S1_at	CA695496	-	-	6e+0	At3g01516	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.88	Ta.578.1.S1_at	BE489213	-	-	9e-1	At3g48185	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.88	TaAffx.83608.1.S1_at	CA655505	-	-	4e+0	At4g10390	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.89	TaAffx.106049.1.S1_at	CA725389	-	-	2e-1	At5g59000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.5	99.7	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
14.8	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
14.1	99.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
13.3	99.5	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
12.9	99.4	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
10.1	99.2	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.3	98.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.2	98.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.9	98.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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