Co-expression analysis

Gene ID	Ta.1739.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At4g28050: TET7 (TETRASPANIN7) (HF=1e-11)
Module size	15 genes
NF	0.54
%ile	80.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.95	Ta.1739.2.S1_a_at	BE443920	-	-	1e-11	At4g28050	TET7 (TETRASPANIN7)	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.97	Ta.7431.1.A1_at	CD889539	-	-	2e+0	At2g45010	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.96	Ta.13246.1.S1_x_at	BQ170339	-	-	3e-6	At2g28350	ARF10 (AUXIN RESPONSE FACTOR 10)	O.I.	H.G.	S.X.	Please select
0.72	88.3	0.97	Ta.9330.1.S1_at	CN008838	-	-	1e-54	At1g14320	SAC52 (SUPPRESSOR OF ACAULIS 52)	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.96	Ta.5107.1.A1_at	BJ274031	-	-	5e-2	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.97	Ta.11813.1.A1_at	CK207632	-	-	5e+0	At1g53650	CID8 (CTC-INTERACTING DOMAIN 8)	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.96	TaAffx.68567.1.A1_s_at	BE427697	-	-	1e+1	At3g43290	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.9603.1.S1_s_at	BJ225210	-	-	1e+1	At4g14272	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	Ta.12536.1.S1_at	CD452355	-	-	5e-1	At2g28790	osmotin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	Ta.4840.1.S1_at	CA704602	-	-	6e+0	At5g57640	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.10348.1.S1_a_at	CD894807	-	-	6e+0	At5g57640	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.5980.1.S1_at	BQ169159	-	-	2e-1	At5g24890	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.96	Ta.25822.1.A1_x_at	CD374105	-	-	2e-3	At1g79310	AtMC7 (metacaspase 7)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.96	Ta.25822.1.A1_at	CD374105	-	-	2e-3	At1g79310	AtMC7 (metacaspase 7)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.96	Ta.25944.1.A1_at	CD454655	-	-	5e+0	At5g09510	40S ribosomal protein S15 (RPS15D)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	94.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.4	92.0	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2	91.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.2	91.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.2	91.0	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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