Co-expression analysis

Gene ID	Ta.17356.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g34970: ADF9 (ACTIN DEPOLYMERIZING FACTOR 9) (HF=1e-1)
Module size	6 genes
NF	0.09
%ile	20.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.84	Ta.17356.1.S1_at	CA619985	-	-	1e-1	At4g34970	ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.24041.1.A1_x_at	CA722251	-	-	1e+0	At4g36240	zinc finger (GATA type) family protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	Ta.18356.1.S1_at	CA635027	-	-	3e+0	At1g48000	MYB112 (myb domain protein 112)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.95	Ta.3444.1.S1_at	BJ251316	-	-	5e-1	At4g26965	NADH:ubiquinone oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.95	TaAffx.84292.1.S1_at	CA640524	-	-	2e+0	At4g05070	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.92	TaAffx.34643.1.S1_at	CA705309	-	-	5e-2	At3g07510	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.3	95.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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