Co-expression analysis

Gene ID Ta.17050.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g61870: unknown protein (HF=9e-7)
Module size 6 genes
NF 0.34
%ile 55.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.60.94Ta.17050.1.S1_a_atCA721584--9e-7At3g61870unknown proteinO.I.H.G.S.X.
0.6786.30.97Ta.28670.1.S1_x_atCA625828--4e-33At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)O.I.H.G.S.X.
0.6786.30.97Ta.12695.1.S1_atCD373734--8e-3At5g54170-O.I.H.G.S.X.
0.5576.80.96Ta.28670.1.S1_atCA625828--4e-33At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)O.I.H.G.S.X.
0.3040.90.97Ta.27728.1.S1_atAF314182.2triose phosphate translocator-3e-22At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)O.I.H.G.S.X.
0.1112.40.95Ta.23411.1.S1_atBJ272562--3e-57At3g60750transketolase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.099.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
20.399.7GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
9.699.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.999.0GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.498.6GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.298.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.897.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.496.8GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.psZO001iF05r_s_at, orthologous to the query gene, Ta.17050.1.S1_a_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6PsAffx.psZO001iF05r_s_atAt3g61870--4e+0At4g34290SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.5071.7PsAffx.C144000008_atAt3g61870--2e+0At3g20090CYP705A18O.I.H.G.S.X.
0.4057.1PsAffx.C67000045_atAt3g61870--8e+0At4g19200proline-rich family proteinO.I.H.G.S.X.
0.2939.0PsAffx.C68000043_s_atAt3g61870--5e-1At2g24310unknown proteinO.I.H.G.S.X.
0.1721.2PsAffx.C143000013_atAt3g61870--2e+0At5g49800-O.I.H.G.S.X.
0.0912.0PsAffx.C215000004_atAt3g61870--8e-2At3g53470unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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