Co-expression analysis

Gene ID	Ta.16922.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g26230: 60S ribosomal protein L31 (RPL31B) (HF=9e+0)
Module size	7 genes
NF	0.14
%ile	27.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	98.5	0.95	Ta.16922.1.S1_at	CA615178	-	-	9e+0	At4g26230	60S ribosomal protein L31 (RPL31B)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	Ta.10763.1.S1_at	BQ166488	-	-	9e-1	At1g62240	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.97	Ta.10522.1.A1_at	BQ170445	-	-	5e+0	At5g51450	RIN3 (RPM1 INTERACTING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.96	Ta.14790.1.S1_at	CA682111	-	-	9e+0	At4g21110	G10 family protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.98	Ta.6061.1.A1_at	BJ272216	-	-	8e-1	At3g29300	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.96	Ta.6094.1.A1_at	BJ249961	-	-	2e+0	At5g66000	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.96	Ta.22058.2.S1_a_at	BJ276634	-	-	1e+0	At2g24395	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.1	99.4	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
10.2	99.2	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
9.4	99.1	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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