Co-expression analysis

Gene ID Ta.16725.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g66570: PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1) (HF=8e-3)
Module size 27 genes
NF 0.47
%ile 73.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9899.90.93Ta.16725.1.S1_atCD373703--8e-3At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.H.G.S.X.
0.6182.00.96Ta.21983.1.S1_atBJ218472--4e-1At2g14760basic helix-loop-helix protein / bHLH proteinO.I.H.G.S.X.
0.5879.20.94Ta.25333.1.S1_atCD454282--1e-1At3g49960peroxidase, putativeO.I.H.G.S.X.
0.5678.60.93Ta.10958.1.S1_atBQ166902--7e+0At4g1045060S ribosomal protein L9 (RPL90D)O.I.H.G.S.X.
0.5576.80.96Ta.556.1.S1_atCA671780--1e+0At3g43960cysteine proteinase, putativeO.I.H.G.S.X.
0.5576.80.96Ta.556.1.S1_x_atCA671780--1e+0At3g43960cysteine proteinase, putativeO.I.H.G.S.X.
0.5273.70.98Ta.21020.1.S1_atCD895774--3e+0At3g57710protein kinase family proteinO.I.H.G.S.X.
0.5273.70.96Ta.30755.1.S1_atCN007962--1e+0At3g09750unknown proteinO.I.H.G.S.X.
0.5072.40.96Ta.8726.1.S1_atCK193715--8e-1At3g47290phosphoinositide-specific phospholipase C family proteinO.I.H.G.S.X.
0.4969.70.97Ta.2870.2.S1_atBJ284170--3e-31At3g17820ATGSKB6O.I.H.G.S.X.
0.4869.00.96Ta.4304.2.S1_a_atCA640847--4e+0At4g25130peptide methionine sulfoxide reductase, putativeO.I.H.G.S.X.
0.4666.80.97Ta.4814.1.A1_atBJ249832--5e-6At2g10560unknown proteinO.I.H.G.S.X.
0.4666.80.97Ta.8197.2.A1_a_atCD886694--1e+0At5g20190bindingO.I.H.G.S.X.
0.4666.80.98Ta.11619.1.A1_atCN011986--2e+1At3g28958plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4666.80.97Ta.27776.1.S1_atBJ274612MADS-box transcription factor TaAGL2-3e-12At4g18960AG (AGAMOUS)O.I.H.G.S.X.
0.4666.80.98Ta.10068.1.S1_atAL830062--8e-2At3g07510unknown proteinO.I.H.G.S.X.
0.4666.80.97Ta.29445.1.S1_atCK212497--3e+0At3g48660unknown proteinO.I.H.G.S.X.
0.4565.20.96Ta.8726.1.S1_s_atCK193715--8e-1At3g47290phosphoinositide-specific phospholipase C family proteinO.I.H.G.S.X.
0.4260.90.97Ta.21792.1.S1_s_atBQ169475--4e-1At1g52330unknown proteinO.I.H.G.S.X.
0.4260.90.98Ta.8258.3.S1_atCN012816--1e+0At3g63095-O.I.H.G.S.X.
0.4159.60.97Ta.8258.2.S1_atBJ233335--1e+0At3g63095-O.I.H.G.S.X.
0.4159.60.96Ta.13256.2.S1_atCK193207--1e-5At4g24180-O.I.H.G.S.X.
0.4058.40.96Ta.27774.1.S1_x_atCN011268--2e+0At3g22580protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3753.00.96Ta.1316.2.S1_x_atCA647764--2e+0At1g09740ethylene-responsive protein, putativeO.I.H.G.S.X.
0.3753.00.96Ta.4814.2.A1_atBJ254722--7e-1At2g31730ethylene-responsive protein, putativeO.I.H.G.S.X.
0.3346.90.95Ta.22220.1.S1_atBT008949.1--5e-9At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)O.I.H.G.S.X.
0.3244.40.96TaAffx.79992.1.S1_atCA704643--2e-1At4g32270unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.6GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.098.0GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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