Co-expression analysis

Gene ID	Ta.1658.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g61790: seven in absentia (SINA) family protein (HF=1e-27)
Module size	6 genes
NF	0.71
%ile	93.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.99	Ta.1658.1.S1_at	CA597357	-	-	1e-27	At3g61790	seven in absentia (SINA) family protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.98	TaAffx.90564.1.S1_at	AJ614677	-	-	6e-47	At3g15060	AtRABA1g (Arabidopsis Rab GTPase homolog A1g)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.98	Ta.3533.1.S1_at	BJ212787	-	-	5e-1	At3g57690	AGP23 (ARABINOGALACTAN-PROTEIN 23)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.99	Ta.9374.2.A1_at	BQ161596	-	-	5e+0	At5g03790	HB51	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.99	Ta.1996.1.S1_s_at	CD374013	-	-	4e-10	At2g47060	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.99	Ta.9374.2.A1_x_at	BQ161596	-	-	5e+0	At5g03790	HB51	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
39.7	99.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
35.8	99.9	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
28.4	99.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
23.2	99.8	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
22.2	99.8	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
21.4	99.7	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.7	97.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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