Co-expression analysis

Gene ID Ta.16491.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g07190: - (HF=9e+0)
Module size 20 genes
NF 0.36
%ile 58.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.30.85Ta.16491.1.S1_atCA607237--9e+0At3g07190-O.I.H.G.S.X.
0.4666.80.88Ta.22743.1.S1_x_atCA652933--7e+0At4g12090cornichon family proteinO.I.H.G.S.X.
0.4464.50.91Ta.3132.1.S1_s_atBJ222897--1e+1At4g28280unknown proteinO.I.H.G.S.X.
0.4464.50.90Ta.7473.1.S1_atCD872898--9e-3At1g74800galactosyltransferase family proteinO.I.H.G.S.X.
0.4362.20.89Ta.21029.1.S1_atCA647347--2e-1At3g02000ROXY1O.I.H.G.S.X.
0.4260.90.90Ta.13302.1.S1_atBQ801428--5e+0At5g15060-O.I.H.G.S.X.
0.4159.60.91Ta.28411.1.A1_atBQ162281--3e-1At4g37010caltractin, putative / centrin, putativeO.I.H.G.S.X.
0.3854.70.90Ta.7022.2.S1_atBF199967--5e-1At1g19320pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.3854.70.92TaAffx.132026.1.A1_atCK205559--5e+0At5g13080WRKY75O.I.H.G.S.X.
0.3651.90.88Ta.1812.1.S1_atCA732920--1e+0At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.3549.80.86Ta.20684.1.S1_atCA604124--5e+0At3g13970APG12B (AUTOPHAGY 12 B)O.I.H.G.S.X.
0.3448.10.90Ta.10500.1.S1_atBJ297310--2e-5At5g35200epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.3346.90.89TaAffx.84007.1.S1_atCA646483--1e+1Atcg00560-O.I.H.G.S.X.
0.2939.20.89Ta.5994.1.S1_atBJ293603--2e-1At3g03760LBD20 (LOB DOMAIN-CONTAINING PROTEIN 20)O.I.H.G.S.X.
0.2939.20.87Ta.19463.1.S1_atCA652153--2e+0At1g20900ESC (ESCAROLA)O.I.H.G.S.X.
0.2939.20.91TaAffx.33753.2.S1_s_atBQ168712--2e+1At2g45630oxidoreductase family proteinO.I.H.G.S.X.
0.2839.20.88Ta.13875.1.S1_atAL830660--2e+0At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)O.I.H.G.S.X.
0.2735.60.88Ta.23766.1.S1_a_atCA663190--1e-2At4g12380unknown proteinO.I.H.G.S.X.
0.2633.60.92TaAffx.64732.1.S1_s_atBJ284034--2e+0At3g12070geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putativeO.I.H.G.S.X.
0.2227.10.90TaAffx.65012.1.S1_atBG607332--6e-4At3g20580COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.1GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.798.9GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.996.1GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.695.6GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.294.8GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.194.5GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.094.3GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.094.3GSM138149genotype F29 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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