Co-expression analysis

Gene ID	Ta.16401.1.A1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g02120: CTP synthase, putative / UTP--ammonia ligase, putative (HF=2e-7)
Module size	7 genes
NF	0.34
%ile	54.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.97	Ta.16401.1.A1_s_at	BJ215044	-	-	2e-7	At4g02120	CTP synthase, putative / UTP--ammonia ligase, putative	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.97	Ta.7590.2.S1_a_at	CK215141	-	-	9e-8	At5g27490	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.9793.1.A1_at	BJ252593	-	-	9e-4	At5g24260	prolyl oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.97	Ta.6850.1.S1_at	BJ311627	-	-	8e-19	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.98	Ta.10490.1.S1_at	BJ270520	-	-	1e-5	At1g28120	-	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.97	Ta.4226.1.A1_at	CD875106	-	-	3e+0	At1g22900	-	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.97	Ta.9136.1.S1_at	CK200225	-	-	3e-1	At1g76420	CUC3 (CUP SHAPED COTYLEDON3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	98.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.7	97.1	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.3	96.7	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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