Co-expression analysis

Gene ID	Ta.1630.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g14850: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.41
%ile	64.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.90	Ta.1630.2.S1_at	CA668027	-	-	2e+0	At3g14850	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.90	TaAffx.82753.2.S1_at	CA667656	-	-	6e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.91	Ta.13841.2.A1_at	CA639514	-	-	4e+0	At2g18876	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.90	Ta.28879.3.S1_at	CA661256	-	-	3e-1	At5g35069	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.90	TaAffx.105396.1.S1_s_at	CA734994	-	-	3e+0	At4g20440	smB (small nuclear ribonucleoprotein associated protein B)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.90	Ta.9136.2.S1_at	CA747260	-	-	3e-2	At5g36240	zinc knuckle (CCHC-type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	99.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.6	99.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3	98.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM143518	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.1	94.5	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.0	94.3	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.0	94.3	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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