Co-expression analysis

Gene ID Ta.16180.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g03410: 2A6 (HF=1e+0)
Module size 6 genes
NF 0.46
%ile 71.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.95Ta.16180.1.A1_atBJ322793--1e+0At1g034102A6O.I.H.G.S.X.
0.6786.30.95Ta.5079.2.S1_x_atCA654780--3e-1At3g16140PSAH-1 (photosystem I subunit H-1)O.I.H.G.S.X.
0.6182.00.95TaAffx.92350.1.S1_atBJ269587--1e+0At5g47306unknown proteinO.I.H.G.S.X.
0.3854.70.95TaAffx.119601.1.S1_atBJ266980--9e+0At5g59950RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.3346.90.95TaAffx.80426.1.S1_atCA600418--4e-1At2g12935unknown proteinO.I.H.G.S.X.
0.2532.10.95Ta.25608.2.S1_a_atCA739102--3e+0At1g77765unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.4GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.396.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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