Co-expression analysis

Gene ID	Ta.16082.1.A1_a_at
Gene name	WRKY transcription factor /// WRKY transcription factor
Homology with Arabidopsis	Similar to At3g06780: glycine-rich protein (HF=5e-1)
Module size	6 genes
NF	0.72
%ile	93.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.91	Ta.16082.1.A1_a_at	CA624333	WRKY transcription factor /// WRKY transcription factor	-	5e-1	At3g06780	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.94	Ta.4678.1.S1_at	CD935984	WRKY8 transcription factor	-	3e+0	At5g07100	WRKY26	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.93	Ta.4678.1.S1_x_at	CD935984	WRKY8 transcription factor	-	3e+0	At5g07100	WRKY26	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.93	Ta.4678.3.S1_x_at	CK215282	WRKY8 transcription factor	-	5e+0	At3g21150	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.93	Ta.24601.1.S1_at	BQ483742	-	-	1e+0	At1g49400	emb1129 (embryo defective 1129)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.93	Ta.30507.2.S1_x_at	BJ321266	-	-	4e+0	At4g03600	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.8	99.5	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
13.0	99.4	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.6	99.2	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.4	99.1	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.0	98.8	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.8	98.7	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.2	98.5	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM143525	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.3	98.2	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.9	98.0	GSM143524	Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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