Co-expression analysis

Gene ID Ta.16082.1.A1_a_at
Gene name WRKY transcription factor /// WRKY transcription factor
Homology with ArabidopsisSimilar to At3g06780: glycine-rich protein (HF=5e-1)
Module size 6 genes
NF 0.72
%ile 93.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.91Ta.16082.1.A1_a_atCA624333WRKY transcription factor /// WRKY transcription factor-5e-1At3g06780glycine-rich proteinO.I.H.G.S.X.
0.7389.10.94Ta.4678.1.S1_atCD935984WRKY8 transcription factor-3e+0At5g07100WRKY26O.I.H.G.S.X.
0.7188.00.93Ta.4678.1.S1_x_atCD935984WRKY8 transcription factor-3e+0At5g07100WRKY26O.I.H.G.S.X.
0.6786.30.93Ta.4678.3.S1_x_atCK215282WRKY8 transcription factor-5e+0At3g21150zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.6786.30.93Ta.24601.1.S1_atBQ483742--1e+0At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.5779.20.93Ta.30507.2.S1_x_atBJ321266--4e+0At4g03600unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.899.5GSM143523Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
13.099.4GSM138169genotype B68 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
10.699.2GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
9.499.1GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
8.098.8GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
7.898.7GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.298.5GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.098.5GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
6.398.2GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.998.0GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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