Co-expression analysis

Gene ID Ta.15977.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g62950: catalytic/ nucleotide binding (HF=1e+1)
Module size 6 genes
NF 0.02
%ile 5.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.86Ta.15977.1.S1_atCA502660--1e+1At5g62950catalytic/ nucleotide bindingO.I.H.G.S.X.
0.2227.10.90Ta.10031.1.S1_atBJ269082--1e+1At3g49551unknown proteinO.I.H.G.S.X.
0.023.60.94TaAffx.84292.1.S1_atCA640524--2e+0At4g05070unknown proteinO.I.H.G.S.X.
0.012.40.93Ta.22350.1.S1_atCA741355--6e+0At3g27430PBB1O.I.H.G.S.X.
0.012.40.93Ta.533.1.A1_atBE605083--2e+1At5g09805IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)O.I.H.G.S.X.
0.012.40.93Ta.2806.1.A1_atBG905561--7e-1At2g38180GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.199.7GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
19.899.7GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
19.199.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
18.599.7GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
17.299.6GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
11.199.3GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.398.6GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.397.6GSM138163genotype E5 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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