Co-expression analysis

Gene ID	Ta.15682.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g09032: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.01
%ile	3.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.68	Ta.15682.1.S1_at	CA486291	-	-	3e+0	At3g09032	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.92	Ta.1679.3.S1_at	CA610132	-	-	3e-1	At5g45590	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.93	TaAffx.128418.127.A1_x_at	CA730835	-	-	1e+0	At2g15830	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.92	Ta.544.1.S1_at	BE606312	-	-	1e+0	At4g37090	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.93	Ta.12023.1.A1_at	BQ171287	-	-	2e+0	At3g04800	ATTIM23-3	O.I.	H.G.	S.X.	Please select
-	0.7	0.91	Ta.18421.1.S1_at	CA636274	-	-	3e-6	At2g37250	ADK (ADENOSINE KINASE)	O.I.	H.G.	S.X.	Please select

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	98.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3	96.7	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.2	96.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage