Co-expression analysis

Gene ID	Ta.15405.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g17975: zinc finger (Ran-binding) family protein (HF=4e+0)
Module size	6 genes
NF	0.08
%ile	19.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.77	Ta.15405.1.S1_at	CA484292	-	-	4e+0	At2g17975	zinc finger (Ran-binding) family protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.93	TaAffx.37969.1.S1_at	BJ256880	-	-	3e-2	At3g19400	cysteine proteinase, putative	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.93	TaAffx.111137.1.S1_at	CA647309	-	-	9e-1	At5g10730	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.93	TaAffx.7846.1.S1_at	CA647264	-	-	2e+1	At5g15670	F-box family protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.94	TaAffx.105451.1.S1_at	CA734135	-	-	1e+0	At3g06730	thioredoxin family protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.93	Ta.3501.3.A1_at	CA658638	-	-	3e-1	At5g08330	TCP family transcription factor, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	99.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
7.2	98.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.9	98.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM143505	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.3	95.0	GSM138208	genotype H23 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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