Co-expression analysis

Gene ID	Ta.1529.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g39280: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (HF=5e-21)
Module size	6 genes
NF	0.70
%ile	92.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.1529.1.S1_at	CK153906	-	-	5e-21	At4g39280	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.2490.1.S1_at	BJ250631	-	-	4e-46	At3g59990	MAP2B (METHIONINE AMINOPEPTIDASE 2B)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.8547.1.S1_at	M95747.1	initiation factor (iso)4f p82 subunit	-	8e-15	At5g57870	eukaryotic translation initiation factor 4F, putative / eIF-4F, putative	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.98	Ta.7894.1.S1_at	CA678008	-	-	1e-27	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.11322.1.A1_at	BQ169845	-	-	2e-2	At2g26590	adhesion regulating molecule family	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.99	Ta.4582.1.S1_at	CK172043	-	-	3e-23	At3g52140	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.7	99.5	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
9.0	99.0	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5	95.4	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.8	93.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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