Co-expression analysis

Gene ID	Ta.1517.1.S1_at
Gene name	porphobilinogen deaminase
Homology with Arabidopsis	Similar to At5g08280: HEMC (HYDROXYMETHYLBILANE SYNTHASE) (HF=1e-5)
Module size	6 genes
NF	0.46
%ile	72.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.97	Ta.1517.1.S1_at	CA629173	porphobilinogen deaminase	-	1e-5	At5g08280	HEMC (HYDROXYMETHYLBILANE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.96	Ta.9760.1.A1_at	BQ169380	-	-	3e-32	At1g60550	ECHID (ENOYL-COA HYDRATASE/ISOMERASE D)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.97	Ta.4937.1.A1_at	BQ166316	-	-	3e-1	At1g06515	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.25402.1.S1_at	CK160504	-	-	4e-42	At1g11430	plastid developmental protein DAG, putative	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.96	Ta.7649.1.S1_at	BJ242983	-	-	2e-4	At1g12410	CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.96	Ta.7649.1.S1_x_at	BJ242983	-	-	2e-4	At1g12410	CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
33.5	99.9	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
22.2	99.8	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
11.8	99.3	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.1	99.2	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.1	99.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.0	99.0	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.8	98.9	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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