Co-expression analysis

Gene ID Ta.147.1.S1_at
Gene name agglutinin isolectin D precursor
Homology with ArabidopsisSimilar to At5g66040: STR16 (SULFURTRANSFERASE PROTEIN 16) (HF=2e+0)
Module size 6 genes
NF 0.45
%ile 70.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.93Ta.147.1.S1_atM25537.1agglutinin isolectin D precursor-2e+0At5g66040STR16 (SULFURTRANSFERASE PROTEIN 16)O.I.H.G.S.X.
0.7790.80.89TaAffx.69777.1.S1_atJ02961.1--1e-4At2g43570chitinase, putativeO.I.H.G.S.X.
0.6182.00.88Ta.28378.2.S1_atBE515510--1e+0At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)O.I.H.G.S.X.
0.3854.70.92Ta.5396.2.S1_a_atBJ287380--5e+0At5g48820ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)O.I.H.G.S.X.
0.2329.00.92Ta.27658.1.S1_atBT009528.1--8e-29At2g19450TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)O.I.H.G.S.X.
0.1719.80.92Ta.10760.1.S1_atBQ806324--5e-1At1g70310SPDS2 (spermidine synthase 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.699.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
16.899.6GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
16.099.6GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
15.699.6GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
10.199.2GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
9.099.0GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.498.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM298063Crown tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.24010.2.S1_at, orthologous to the query gene, Ta.147.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8296.3PtpAffx.24010.2.S1_atAt5g66040hypothetical protein-3e+0At5g12390FIS1B (FISSION 1B)O.I.H.G.S.X.
0.4067.0PtpAffx.217440.1.S1_atAt5g66040hypothetical protein-2e+1At3g09922IPS1 (INDUCED BY PHOSPHATE STARVATION1)O.I.H.G.S.X.
0.4067.0PtpAffx.43228.1.A1_atAt5g66040--1e+0At3g28620zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1626.9PtpAffx.212310.1.S1_atAt5g66040hypothetical protein-1e+0At3g04220disease resistance protein (TIR-NBS-LRR class), putativeO.I.H.G.S.X.
0.1423.5PtpAffx.206853.1.S1_atAt5g66040hypothetical protein-2e-4At5g10730binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.1219.6PtpAffx.212054.1.S1_atAt5g66040--3e-20Atcg00040-O.I.H.G.S.X.
0.1118.1PtpAffx.214875.1.S1_atAt5g66040hypothetical protein-7e-1At5g44560VPS2.2O.I.H.G.S.X.
0.0914.6PtpAffx.224408.1.S1_atAt5g66040hypothetical protein-4e-2At2g44110MLO15 (MILDEW RESISTANCE LOCUS O 15)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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