Co-expression analysis

Gene ID	Ta.147.1.S1_at
Gene name	agglutinin isolectin D precursor
Homology with Arabidopsis	Similar to At5g66040: STR16 (SULFURTRANSFERASE PROTEIN 16) (HF=2e+0)
Module size	6 genes
NF	0.45
%ile	70.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.93	Ta.147.1.S1_at	M25537.1	agglutinin isolectin D precursor	-	2e+0	At5g66040	STR16 (SULFURTRANSFERASE PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.89	TaAffx.69777.1.S1_at	J02961.1	-	-	1e-4	At2g43570	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.88	Ta.28378.2.S1_at	BE515510	-	-	1e+0	At2g02100	LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.92	Ta.5396.2.S1_a_at	BJ287380	-	-	5e+0	At5g48820	ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.92	Ta.27658.1.S1_at	BT009528.1	-	-	8e-29	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.92	Ta.10760.1.S1_at	BQ806324	-	-	5e-1	At1g70310	SPDS2 (spermidine synthase 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.6	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
16.8	99.6	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
16.0	99.6	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
15.6	99.6	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
10.1	99.2	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
9.0	99.0	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
8.4	98.9	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.92499.1.S1_s_at, orthologous to the query gene, Ta.147.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	GmaAffx.92499.1.S1_s_at	At5g66040	Win gene encoding wound-induced protein	-	2e-15	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	O.I.	H.G.	S.X.	Please select
0.61	81.8	GmaAffx.92620.1.S1_s_at	At5g66040	-	-	4e-6	At3g44250	CYP71B38	O.I.	H.G.	S.X.	Please select
0.50	71.7	Gma.153.1.S1_x_at	At5g66040	-	-	1e-6	At3g44250	CYP71B38	O.I.	H.G.	S.X.	Please select
0.43	60.6	GmaAffx.93392.1.S1_s_at	At5g66040	-	-	2e-5	At5g42510	disease resistance-responsive family protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	Gma.2308.1.S1_s_at	At5g66040	isoflavone synthase 2	-	6e-2	At1g67195	MIR414 (MICRORNA 414)	O.I.	H.G.	S.X.	Please select
0.30	40.4	GmaAffx.92722.1.S1_at	At5g66040	2-hydroxyisoflavanone dehydratase	-	6e-1	At2g30050	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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