Co-expression analysis

Gene ID Ta.14579.1.S1_at
Gene name 20S proteasome beta 5 subunit
Homology with ArabidopsisSimilar to At3g26340: 20S proteasome beta subunit E, putative (HF=8e-10)
Module size 6 genes
NF 0.28
%ile 45.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.98Ta.14579.1.S1_atBJ21726920S proteasome beta 5 subunit-8e-10At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.4058.40.98Ta.1348.1.S1_atCA635748--5e-1At5g4562026S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.3854.70.98Ta.808.1.S1_atBJ217235HBP-1b-2e-5At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.2024.00.98Ta.10045.1.S1_a_atCA604324--1e-52At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.1922.40.98Ta.6402.1.S1_atCK151576--2e-1At3g45280SYP72 (SYNTAXIN OF PLANTS 72)O.I.H.G.S.X.
0.1213.30.98Ta.2942.2.S1_x_atBJ261425--5e-6At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.395.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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