Co-expression analysis

Gene ID	Ta.14558.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g17770: ATTPS5 (HF=2e-5)
Module size	6 genes
NF	0.04
%ile	12.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.89	Ta.14558.1.S1_at	BT009244.1	-	-	2e-5	At4g17770	ATTPS5	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.93	Ta.4968.1.S1_at	CA652509	-	-	4e-2	At1g21450	SCL1 (SCARECROW-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.90	TaAffx.12310.2.A1_at	BJ272939	-	-	7e-2	At4g37840	HKL3 (HEXOKINASE-LIKE 3)	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.90	Ta.30375.1.A1_at	CK199586	-	-	4e-7	At2g43200	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.89	Ta.29508.1.S1_at	CD373618	-	-	7e-11	At1g21400	2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.91	Ta.7718.1.S1_at	BE429630	-	-	4e-3	At4g35600	CONNEXIN 32	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	96.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.8	93.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.6	92.9	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.6	92.9	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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