Co-expression analysis

Gene ID	Ta.14551.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g65710: unknown protein (HF=5e-1)
Module size	17 genes
NF	0.37
%ile	59.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.14551.1.S1_at	CK172291	-	-	5e-1	At1g65710	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.99	Ta.21547.1.S1_x_at	CK165976	-	-	2e-3	At1g14980	CPN10 (CHAPERONIN 10)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.99	Ta.12870.1.S1_at	BJ322687	-	-	8e-52	At1g04480	60S ribosomal protein L23 (RPL23A)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.99	Ta.28199.1.S1_at	BJ297475	-	-	2e-4	At1g18800	NRP2 (NAP1-RELATED PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.51	73.0	0.99	Ta.6182.1.S1_at	CA604745	eukaryotic translation initiation factor 3 subunit g	-	1e-17	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.99	Ta.21547.1.S1_at	CK165976	-	-	2e-3	At1g14980	CPN10 (CHAPERONIN 10)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.99	Ta.28317.1.S1_at	BQ806898	-	-	9e-12	At1g33120	60S ribosomal protein L9 (RPL90B)	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.99	Ta.11802.1.S1_at	BQ170830	-	-	2e-6	At2g18990	TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.99	Ta.2097.2.S1_x_at	CA638237	-	-	3e-12	At3g12390	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.99	Ta.6074.1.S1_at	BJ214722	-	-	6e-28	At3g05560	60S ribosomal protein L22-2 (RPL22B)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.98	Ta.30760.1.A1_x_at	CK198315	-	-	3e+1	At4g24910	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.99	Ta.28317.1.S1_x_at	BQ806898	-	-	9e-12	At1g33120	60S ribosomal protein L9 (RPL90B)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.99	Ta.2097.1.S1_x_at	CA719770	-	-	2e-32	At3g12390	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.99	Ta.24826.3.S1_at	BJ263115	-	-	8e-34	At2g34480	60S ribosomal protein L18A (RPL18aB)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.99	Ta.24826.3.S1_x_at	BJ263115	-	-	8e-34	At2g34480	60S ribosomal protein L18A (RPL18aB)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.98	Ta.2097.3.S1_x_at	AL820606	-	-	1e-9	At4g10480	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.98	Ta.28308.1.S1_at	BJ217291	-	-	2e-15	At3g28900	60S ribosomal protein L34 (RPL34C)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.8	98.9	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.7	98.9	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
8.1	98.8	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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