Co-expression analysis

Gene ID	Ta.14513.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g12710: AtPP2-A12 (Phloem protein 2-A12) (HF=2e-4)
Module size	6 genes
NF	0.64
%ile	88.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.93	Ta.14513.1.S1_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.92	Ta.14513.1.S1_a_at	CA498740	-	-	2e-4	At1g12710	AtPP2-A12 (Phloem protein 2-A12)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.92	TaAffx.114664.3.S1_s_at	CA735933	-	-	6e-4	At1g77855	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.93	TaAffx.114664.2.A1_at	BJ274528	-	-	1e+0	At2g21740	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.15094.1.S1_x_at	CA689877	-	-	9e-1	At1g63090	AtPP2-A11 (Phloem protein 2-A11)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.93	TaAffx.38522.1.A1_at	BJ221646	-	-	3e-1	At2g01200	IAA32 (INDOLE-3-ACETIC ACID INDUCIBLE 32)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.0	99.7	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
7.6	98.7	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.8	97.9	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.6	97.8	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.3	97.6	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM246399	SB3_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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