Co-expression analysis

Gene ID	Ta.14480.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g33040: ATP synthase gamma chain, mitochondrial (ATPC) (HF=3e-28)
Module size	6 genes
NF	0.55
%ile	81.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.14480.2.S1_at	BU099921	-	-	3e-28	At2g33040	ATP synthase gamma chain, mitochondrial (ATPC)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.99	Ta.2444.1.S1_at	BJ274561	F1-ATPase	-	7e-1	At2g24520	AHA5 (Arabidopsis H(+)-ATPase 5)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.13777.1.S1_at	CN013134	-	-	1e-38	At3g52300	ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.28376.1.S1_at	CK167966	-	-	1e-73	At3g27240	cytochrome c1, putative	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.27578.1.S1_at	CN013235	-	-	1e-43	At3g02090	mitochondrial processing peptidase beta subunit, putative	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.98	Ta.23107.1.S1_a_at	CK156982	-	-	1e-51	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.7	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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