Co-expression analysis

Gene ID	Ta.14469.2.A1_a_at
Gene name	MADS-box transcription factor TaAGL16
Homology with Arabidopsis	Similar to At3g61120: AGL13 (AGAMOUS-LIKE 13) (HF=2e-5)
Module size	6 genes
NF	0.71
%ile	93.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.14469.2.A1_a_at	CD374109	MADS-box transcription factor TaAGL16	-	2e-5	At3g61120	AGL13 (AGAMOUS-LIKE 13)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.12700.1.S1_at	AB084577.1	MADS box transcription factor	-	3e-6	At2g42830	SHP2 (SHATTERPROOF 2)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.14469.3.S1_a_at	BJ276784	MADS-box transcription factor TaAGL16	-	3e-5	At3g61120	AGL13 (AGAMOUS-LIKE 13)	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.98	Ta.13865.1.S1_at	AF543316.1	MADS box protein	-	3e-9	At5g15800	SEP1 (SEPALLATA1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.9527.1.S1_x_at	BJ254990	-	-	1e+1	At5g44420	PDF1.2	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.98	Ta.10348.1.S1_a_at	CD894807	-	-	6e+0	At5g57640	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.2	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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