Co-expression analysis

Gene ID	Ta.14323.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g18593: dual specificity protein phosphatase-related (HF=1e+1)
Module size	6 genes
NF	0.79
%ile	96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.95	Ta.14323.1.S1_at	BU100287	-	-	1e+1	At4g18593	dual specificity protein phosphatase-related	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.93	Ta.11847.1.A1_at	BQ170925	-	-	1e+0	At1g49110	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.93	TaAffx.121733.1.S1_at	BJ316403	-	-	2e-3	At3g52910	AtGRF4 (GROWTH-REGULATING FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	TaAffx.16068.1.S1_at	BQ168935	-	-	1e+0	At1g33260	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	Ta.6965.1.S1_at	BJ313225	-	-	3e+0	At3g03847	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	TaAffx.91428.1.S1_at	BJ313181	-	-	3e+0	At4g21450	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.1	99.4	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
12.6	99.4	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
12.1	99.4	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
11.4	99.3	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
8.6	98.9	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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