Co-expression analysis

Gene ID	Ta.14271.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g46210: CUL4 (CULLIN4) (HF=3e-34)
Module size	6 genes
NF	0.25
%ile	42.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.97	Ta.14271.1.S1_at	BQ838640	-	-	3e-34	At5g46210	CUL4 (CULLIN4)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.98	Ta.11079.2.S1_at	CA655580	-	-	4e+0	At3g59430	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.29633.1.S1_at	CK209176	-	-	1e-4	At3g17750	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	Ta.7298.1.S1_s_at	CK156482	-	-	2e-15	At4g15180	SDG2 (SET DOMAIN-CONTAINING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.97	Ta.30926.1.S1_at	CD895641	-	-	1e-6	At1g50410	SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.97	Ta.1143.1.S1_at	BF473597	-	-	1e-13	At1g64550	ATGCN3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.5	99.8	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
22.9	99.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
15.6	99.6	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
10.0	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.5	97.8	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM250906	TcLr34_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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