Co-expression analysis

Gene ID Ta.14146.3.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g24313: unknown protein (HF=2e+1)
Module size 6 genes
NF 0.54
%ile 80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.00.95Ta.14146.3.S1_x_atCA697368--2e+1At5g24313unknown proteinO.I.H.G.S.X.
0.6081.00.95Ta.3083.2.A1_atBJ254365--4e+0At3g05602unknown proteinO.I.H.G.S.X.
0.4767.90.94TaAffx.38268.1.A1_atBJ242361--1e+0At1g21326VQ motif-containing proteinO.I.H.G.S.X.
0.4464.50.95Ta.14479.3.S1_x_atCA630294--7e-18At2g05830eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.
0.3651.90.95TaAffx.56155.1.S1_atCA656564--1e+1At5g26070hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3346.90.95TaAffx.64591.1.S1_atBJ288225--1e+0At1g19010unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.698.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.498.2GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.897.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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